Naipunnya school of management is established and managed by Ernakulam angamaly arch diocese. The patron of the institution is his holiness cardinal George Alencherry. The director of the institution is Bishop mar Jose puthenveetil. The executive director and principal of the institution is Fr.Dr. Paul Kaithottungal . Executive director is assisted by the Asst. Executive director Fr.Sibi Puthenparampil.
To share the inputs and analyze the functioning the institution has a board of trustees and an advisory board including eminent personalities from academic and nonacademic background